Ms. Dima Sabbah, Ph.D.
Assistant Professor, College of Pharmacy
Al-Zaytoonah Private University
جامعة الزيتونة الأردنية
Amman, Jordan
Assistant Professor, College of Pharmacy
Al-Zaytoonah Private University
جامعة الزيتونة الأردنية
Amman, Jordan
Dima Azzam Sabbah B. Pharm., M.S., Ph.D. Pharm. Sci. Al-Zaytoonah University of Jordan, College of Pharmacy, Department of Pharmaceutical Sciences P. O. Box 130 Amman 11733 Jordan +9626-429-1511 (Ext 296) (Office) +9627-974-949-27 (cell phone) dima_sabbah@yahoo.com dimasabbah@yahoo.com, dima.sabbah@zuj.edu
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Research explores the structure features of proteins to design selective ligands. Generate a pharmacophore model to identify the functional groups recognized at the binding sites to induce an activity. Virtual screening to identify possible hits.
Run molecular dynamic simulation to identify the key binding residues in dynamic interaction. Perform computational alanine scanning and calculate free energy of binding. Synthesis and characterization of molecules.
Run molecular dynamic simulation to identify the key binding residues in dynamic interaction. Perform computational alanine scanning and calculate free energy of binding. Synthesis and characterization of molecules.
Experience
Assistant Professor
Al-Zaytoonah Private University of Jordan
Lecturing Medicinal Chemistry, Drug Design, Organic Chemistry, Pharmaceutical Analytical Chemistry
Research Assistant
University of Nebraska Medical Center
Working on the following projects:
Computational Methods and Inhibitors Design of PI3Kalpha.
Molecular Dynamic Simulations for Beta-Secretase
Exploring the Binding structure of Plasmodium Falciparum Hexose Transporter Protein
Computational Methods and Inhibitors Design of PI3Kalpha.
Molecular Dynamic Simulations for Beta-Secretase
Exploring the Binding structure of Plasmodium Falciparum Hexose Transporter Protein
Ph.D. Student
University of Nebraska Medical Center
Ph.D. Student at College of Pharmacy
- (Open)1 project
MORE..................
Assistant Professor, October 2012-Present, College of Pharmacy, Al- Zaytoonah University of Jordan
Teaching Medicinal Chemistry (I /II) and Drug Design courses for Undergraduates Pharmacy Students. Teaching Advanced Medicinal Chemistry, Drug Design, and Research Methodology courses for Postgraduates Master Pharmacy Students.
Supervisory Committee Member for Master Students.
Supervise Master Students and their thesis. The Chair of the Conference Committee: o Organized One day symposium on Cancer, May 15, 2013 entitled "Cancer: Causes, Diagnosis, and Treatment".
Graduate Research Assistant, Aug 2007- June 2012, University of Nebraska Medical Center
Homology modeling of phosphoinositide -3- kinases (PI3Ks) using MOE
Pharmacophore Generation for PI3Kα selective inhibitors using MOE
Pharmacophore Search against the National Cancer Institute database using MOE
Molecular Dynamic simulations for the kinase domains of PI3Ks using the AMBER 10 package
Calculating the binding free energies of prospective inhibitors using the MM/GBSA (molecular mechanics/ generalized born surface area) method in AMBER10
Recruiting the computational alanine- scanning approach to calculate the relative change in free energy of binding (ΔΔ G bind) for the alanine mutants of binding residues in the protein using MM/GBSA in AMBER10
Docking studies for PI3K inhibitors using Glide dock in MAESTRO
Design and Synthesis of novel PI3Kα inhibitors
Molecular Dynamic simulations for 16 models of β-secretase protein using the AMBER 10 package
Lecturer, 2004 - 2007, College of Pharmacy, AL-Zaytoonah Private University of Jordan, Amman, Jordan
General Chemistry, Pharmaceutical Organic Chemistry, Pharmaceutical Analytical Chemistry, Pharmaceutical Medicinal Chemistry II, Pharmaceutical Medicinal Chemistry I lab, Pharmaceutical Analytical Chemistry Lab, Phytochemistry Lab, Pharmaceutics I Lab, Pharmaceutical Physical Lab I, Microbiology, Microbiology Lab, Parasitology Lab, Pharmaceutical Microbiology Lab.
Teaching Assistant, 1996 – 2004, College of Pharmacy, AL-Zaytoonah Private University of Jordan, Amman, Jordan
Pharmacognosy Lab, Phytochemistry Lab, Pharmaceutical Organic Chemistry Lab, Pharmaceutical Analytical Chemistry Lab, Pharmaceutical Medicinal Chemistry Lab, Pharmaceutical Microbiology Lab, Pharmaceutical Biochemistry Lab. Technical Skills Molecular Modeling Software (MOE, MAESTRO , PYMOL and AMBER) Computer Skills in MS Word, MS Excel, Power Point, and basic Internet Skills 3 Chemical : Nuclear Magnetic Resonance Spectroscopy, Gas Chromatography Mass Spectroscopy
Education
2007-2012 Ph.D. in Pharmaceutical Sciences, University of Nebraska Medical Center (UNMC), NE, USA. Thesis Supervisors: Profs. Jonathan L. Vennerstrom and Haizhen Zhong. Thesis Title: Computational Studies and Inhibitors Design of PI3Kα.
2009-2011 Side Project: Modeling the protonation states of β-secretase Binding Pocket.
2001-2003 M.S. in Pharmaceutical Sciences, University of Jordan (UJ), Amman Jordan. Thesis Supervisor: Professor Ali M. Qaisi. Thesis Title: Synthesis of Some Novel Nitrofuran Derivatives of Potential of Potential Antimicrobial Activity.
June 1996 Bachelor of Pharmacy, University of Jordan (UJ), Amman Jordan.
Peer Reviewed Abstracts (10 Published Abstracts)
1. The 44th annual PGSRM, June 7th -9 th, University of Nebraska Medical Center, Omaha, Nebraska. Structure-based drug design, synthesis, and biological evaluation of a novel scaffold for PI3kα inhibitors
2. The Nebraska Academy of Sciences, April 20th , 2012, Lincoln, Nebraska. Oral Presentation: Synthesis, biological evaluation, and molecular docking studies of novel phosphoinositide-3-kinase (PI3kα) inhibitors
3. ACS Denver National Meeting, August 28 – September 1st, 2011. Poster Presentation: Investigation of phosphoinositide 3-kinases binding pocket using mm-pbsa
4. TeraGrid '11, July 18th -21st, 2011, Salt Lake City, Utah. Poster Presentation: Modeling of PI3K using Molecular Dynamic Simulations on UNL Cluster
5. The Nebraska Academy of Sciences, April 15th, 2011, Lincoln, Nebraska. Oral Presentation: Determination of β-secretase binding site charge employing MD simulation and molecular docking
6. ACS Anaheim National Meeting, March 27th -30th, 2011. Poster Presentation: Discovery of Novel Inhibitors of Phosphoinositide-3-Kinases 4
7. The 45th Midwest Regional Meeting of the ACS, October 27th -30th , 2010.Poster Presentation: Pharmacophore Model, Database Search, Docking Study and Biological Assays for Novel PI3Kα Inhibitors
8. AAPS Graduate Student Symposium in Drug Design and Discovery, November 8th -12th , 2009. Oral and Poster Presentations: Selectivity Studies of PI3K Inhibitors by Molecular Docking. This work is honored by the AAPS. “Graduate Student Symposium Award in Drug Design & Discovery”
9. The Nebraska Academy of Sciences, April 17th, 2009, Lincoln, Nebraska. Oral Presentation: Homology Modeling and Docking Studies of PI3Kα/γ
10.The 43 rd ACS Midwest Regional Meeting, October 8th -11th, 2008. Oral Presentation: Computational Studies and Inhibitors Design of PI3Kα
Invited Speaker
1. Chemistry Department, University of Nebraska at Omaha, November 8, 2010. Oral Presentation: Discovery of Novel Inhibitors of Phosphoinositide 3-Kinases
2. Chemistry Department, University of Nebraska at Omaha, October 5, 2009. Oral Presentation: Selectivity Studies of PI3K Inhibitors by Molecular Docking
REFERENCES
Professor Jonathan Vennerstrom, University of Nebraska Medical Center, College of pharmacy, office phone number: 402 559 5362, email: jvenners@unmc.edu, address: 986025 Nebraska Medical Center, Omaha, NE 68198-6025, USA
Professor Edward Roche, University of Nebraska Medical Center, College of pharmacy, office phone number: 402 559 4645, email: eroche@unmc.edu, address: 986025 Nebraska Medical Center, Omaha, NE 68198-6025, USA
Professor Haizhen Zhong, University of Nebraska at Omaha, Chemistry Department, office phone number: 402 554 3145, email: hzhong@unomaha.edu, address: 6001 Dodge Street, Omaha, NE 68182, USA
///////////Dima Azzam Sabbah,
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